HistoPloidyDB is a collection of significant correlations between alterations of canonical and variant histone genes and markers of aneuploidy, by leveraging data from the TCGA cancer project. The database includes alterations in gene expression, mutations, and copy number variations (CNV) of histone families H1, H2A, H2B, and H3 across 20 cancer types.


HistoPloidyDB is part of Ragusa, D. and Vagnarelli, P., Contribution of Histone Variants to Aneuploidy: a Cancer Perspective. Frontiers in Genetics, 14, p.1290903. doi: 10.3389/fgene.2023.1290903


Enter Histone Gene Name - check gene nomenclature in README
HistoPloidy Database
Variation Number TCGA_cancer_type aneuploidy_metric Pearson_correlation odds_ratio P Value Method Histone Family Histone Type Histone Alteration Histone Alteration Detailed